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Gene Expression and Regulation Databases

Store data on gene expression levels and regulatory mechanisms under different tissues, cells, or treatment conditions, supporting expression analysis and regulation research.
    Database Name
    Core Function
    Official Website
  • GEO (Gene Expression Omnibus)
    A high-throughput gene expression database under NCBI, storing expression data from gene chips, RNA-seq, etc., and supporting differential analysis
    https://www.ncbi.nlm.nih.gov/geo/
  • TCGA (The Cancer Genome Atlas)
    Focuses on cancer genome research, containing multi-omics data such as genome sequencing, expression profiles, and methylation of various cancers
    https://portal.gdc.cancer.gov/
  • miRBase
    Stores microRNA sequence and annotation information, including precursor sequences, mature sequences, and target gene prediction results
    https://www.mirbase.org/
  • ArrayExpress
    A gene expression database under EBI, storing microarray and high-throughput sequencing data, covering transcriptomics, chromatin immunoprecipitation, etc.
    https://www.ebi.ac.uk/arrayexpress/

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